Frontiers in Plant Science | Plant Bioinformatics

Original Research

Accepted on 13 May 2025

Genome-wide analysis of Rf-PPR-like (RFL) genes in Nicotiana tabacum and their potential roles in anther development

in Plant Bioinformatics

Wu Mengting
Ji Yan
Zhang Chengbei
Du Shuaibin
Gong Ruqi
Wang Jun
Li Jiayi
Zhong Qiu
Li Yuan
Yang Aiguo

Frontiers in Plant Science

doi 10.3389/fpls.2025.1591130

Original Research

Accepted on 12 May 2025

The Sucrose Synthase Gene Family in Blueberry (Vaccinium darrowii): Functional Insights into the Role of VdSUS4 in Salt Stress Tolerance

in Plant Bioinformatics

Lei Yang
Yanwen Wang
Wenzhu Geng
Hongxia Zhang
Houjun Zhou

Frontiers in Plant Science

doi 10.3389/fpls.2025.1581182

Original Research

Accepted on 12 May 2025

Genome-wide identification, phylogenetic and expression pattern analysis of GATA gene family in Cerasus humilis

in Plant Bioinformatics

Meitong Pan
Chenzhuo Yue
Shan Jiang
Junbai Ma
Lengleng Ma
Lingyang Kong
Yang Ling
Wei Ma
Weichao Ren
Xiubo Liu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1596930

Original Research

Published on 09 May 2025

Integrated metabolomic and transcriptomic analysis provides insights into the browning of walnut endocarps

in Plant Bioinformatics

Yifeng Wang
Mingxia Wang
Yaonian Chen
Wenbin Hu
Shuling Zhao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1582209

409 views

Original Research

Accepted on 08 May 2025

The complex DNA molecular combination with a linear and circular structure in Magnolia kwangsiensis mitochondrial genome

in Plant Bioinformatics

Qing Li
Wentao Sheng

Frontiers in Plant Science

doi 10.3389/fpls.2025.1590173

Original Research

Accepted on 08 May 2025

Unraveling the Mitochondrial Genome of the Medicinal Chinese Motherwort (Leonurus japonicus, Lamiaceae): Structural Dynamics, Organelle-to-Nuclear Gene Transfer, and Evolutionary Implications

in Plant Bioinformatics

Xinyu Bai
Xiaoqun Wang
Qing Liu
Yuqing Feng
Yanbo Huang
Joongku Lee
Goro Kokubugata
Zhechen Qi
Xiaoling Yan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1546449

Original Research

Published on 08 May 2025

Comparative analysis of the organelle genomes of seven Rosa species (Rosaceae): insights into structural variation and phylogenetic position

in Plant Bioinformatics

Rongxiang Zhang
Shuwen Liu
Ying Liu
Pei Wei
Niyan Xiang
Yuemei Zhao
Xiaoman Gao
Yebing Yin
Lijun Qin
Tao Yuan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1584289

455 views

Original Research

Published on 08 May 2025

Comparative transcriptomic analysis of loquat floral fragrance and hormone synthesis regulation across developmental stages in petals and stamens

in Plant Bioinformatics

Jia-Qi Huang
Jia-Qi Wen
Fan Wu
Peng Zhou
Jing-Jing Zhang
Lin-Xuan Wang
Hong-Liang Li

Frontiers in Plant Science

doi 10.3389/fpls.2025.1574771

320 views

Original Research

Published on 02 May 2025

Identification and expression analysis of PAL genes related to chlorogenic acid synthesis in Vaccinium dunalianum Wight

in Plant Bioinformatics

Xiuhua An
Guoze Li
Aiyi Chen
Ping Zhao
Yong Ding

Frontiers in Plant Science

doi 10.3389/fpls.2025.1544303

458 views

Original Research

Accepted on 28 Apr 2025

Genome-Wide Transcriptome Analysis Reveal the Molecular Mechanism for Triggering the Formation of Purple leaves in Rice Mutants nip-lpl and nip-dpl

in Plant Bioinformatics

Chengyu Wang
Yujie Zhou
Hongyu Zhao
Xinyu Chen
Weifang Liang
Han ZHENG
Haipeng Zhang
Fan Hou
Junjie Zhang
Liujie Xie

Frontiers in Plant Science

doi 10.3389/fpls.2025.1584423

277 views

Original Research

Published on 28 Apr 2025

Whole-genome identification of HSF family genes in Cerasus humilis and expression analysis under high-temperature stress

in Plant Bioinformatics

Xiaopeng Mu
Jiating Zhang
Chenyi Wang
Liming Chen
Jianying Zhang
Pengfei Wang
Jiancheng Zhang
Bin Zhang
Junjie Du

Frontiers in Plant Science

doi 10.3389/fpls.2025.1553187

472 views

Original Research

Accepted on 27 Apr 2025

Pan-Genome Analysis of the R2R3-MYB Genes Family in Brassica napus Unveils Phylogenetic Divergence and Expression Profiles under Hormone and Abiotic Stress Treatments

in Plant Bioinformatics

Haiyan Fan
Jiawei Li
Wencong Huang
Aoshuang Liang
Liqing Jing
Jintao Li
Qing-Yong Yang
Kede Liu
Zhiquan Yang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1588362

219 views

Original Research

Published on 25 Apr 2025

Metabolome and transcriptome analyses reveal molecular responses of two potato (Solanum tuberosum L.) cultivars to cold stress

in Plant Bioinformatics

Xiang Li
Zhenzhen Zheng
Yun Zhou
Shenglong Yang
Wang Su
Heng Guo
Guangji Ye
Jian Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1543380

633 views

Original Research

Published on 24 Apr 2025

Organelle genomes of two Scaevola species, S. taccada and S. hainanensis, provide new insights into evolutionary divergence between Scaevola and its related species

in Plant Bioinformatics

Danni Meng
Tianxin Lu
Meng He
Yuze Ren
Mumei Fu
Yuxiao Zhang
Peifeng Yang
Xinyu Lin
Yong Yang
Ying Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1587750

977 views

Original Research

Published on 24 Apr 2025

Analysis of the complete mitogenomes of three high economic value tea plants (Tea-oil Camellia) provide insights into evolution and phylogeny relationship

in Plant Bioinformatics

Heng Liang
Huasha Qi
Chunmei Wang
Yidan Wang
Moyang Liu
Jiali Chen
Xiuxiu Sun
Tengfei Xia
Shiling Feng
Cheng Chen

Frontiers in Plant Science

doi 10.3389/fpls.2025.1549185

893 views

Original Research

Accepted on 22 Apr 2025

SmilODB: A Multi-Omics Database for the Medicinal Plant Danshen (Salvia miltiorrhiza, Lamiaceae)

in Plant Bioinformatics

Yonghui Liu
Wen-Qiong Zeng
Si-Fan Tao
Yi-Nuo Du
Fei-Hong Yu
Zhechen Qi
Dongfeng Yang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1586268

148 views